Where can I find the ensemble gene database tsv file you used in the tutorials (genes_90_38_export.tsv)?

2nd (Invited Participants) Challenge
1

Hi,

I’m having some trouble finding “gene_90_38_export.tsv” on the ensembl website (it was used to plot gene expression analysis at “RPubs - Preparation of training dataset for 2nd CMI-PB challenge”).
Do you happen to know where I can get it?

Thanks!

2

Hi,

The file “gene_90_38_export.tsv” is available for access at this location: https://github.com/CMI-PB/second-challenge-train-dataset-preparation/tree/main/data.

Best,
Pramod

3

Thanks!

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