Debrief Presentation: 1st Place Saonli Basu & Team

2nd (Invited Participants) Challenge
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Please reply with any questions you had from Saonli’s presentation on 3/22.

CMI_PB_Challenge_UMN.pdf (1.6 MB)

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Congratulations on the successful model!

I think one key aspect your group did well was preprocessing the assays effectively. If you don’t mind, could you point me to your preprocessing code (or even better the computable matrices you used in MCIA)? We’re curious to see if our model would improve in performance if the preprocessing were improved.

Thanks!

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Hi @jeremygygi

Meanwhile, I am posting here the Githhub repo that is submitted by the Minnesota team:

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Sure! Sounds like a great idea. The preprocessing code is here:

The MCIA code is available here:

Let us know if you have specific questions about the code.

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